STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl28Mitochondrial ribosomal protein L28. (252 aa)    
Predicted Functional Partners:
mrpl4
Mitochondrial ribosomal protein L4.
   
 
 0.981
ENSSORP00005051669
Mitochondrial ribosomal protein S18A.
   
   0.976
mrpl16
Mitochondrial ribosomal protein L16.
   
 0.970
mrps26
Mitochondrial ribosomal protein S26.
   
 
 0.965
ENSSORP00005023054
Growth arrest and DNA-damage-inducible, gamma interacting protein 1.
   
   0.962
mrpl41
Mitochondrial ribosomal protein L41.
   
   0.960
mrpl40
Mitochondrial ribosomal protein L40.
   
   0.958
mrpl3
Mitochondrial ribosomal protein L3.
   
 
 0.958
mrpl12
Mitochondrial ribosomal protein L12.
   
 
 0.957
mrpl58
Mitochondrial ribosomal protein L58.
   
   0.957
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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