STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOOApolipoprotein O. (189 aa)    
Predicted Functional Partners:
LOC115419850
MICOS complex subunit mic25a-like.
   
 0.960
ENSSORP00005021502
Coiled-coil-helix-coiled-coil-helix domain containing 3a.
   
 0.960
LOC115421245
Vegetative cell wall protein gp1-like.
   
 0.959
LOC115422891
MICOS complex subunit mic25a-like.
   
 0.958
LOC115423189
MICOS complex subunit Mic10-like.
   
 
 0.942
micos10
Mitochondrial contact site and cristae organizing system subunit 10.
   
 
 0.942
micos13
Mitochondrial contact site and cristae organizing system subunit 13.
   
 0.938
immt
Inner membrane mitochondrial protein.
    
 0.898
ENSSORP00005001499
annotation not available
  
  
 
0.801
ENSSORP00005047807
annotation not available
  
  
 
0.801
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.