STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115415948Visual pigment-like receptor peropsin. (336 aa)    
Predicted Functional Partners:
ENSSORP00005025189
Guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2b.
   
 0.737
GNB5
Guanine nucleotide-binding protein subunit beta-5b-like.
    
  0.737
ENSSORP00005049234
Guanine nucleotide binding protein (G protein), beta 5a.
    
  0.737
LOC115423977
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13-like.
    
  0.725
GNG5
G protein subunit gamma 5.
    
  0.725
LOC115430013
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-10-like.
    
  0.725
LOC115432736
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-8-like.
    
  0.722
gng3
G protein subunit gamma 3.
    
  0.722
LOC115428392
Guanine nucleotide-binding protein G(T) subunit gamma-T1-like.
   
 0.682
LOC115428392-2
Guanine nucleotide-binding protein G(T) subunit gamma-T1-like.
   
 0.682
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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