STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYN3Synapsin III. (518 aa)    
Predicted Functional Partners:
ENSSORP00005013837
annotation not available
     
 0.757
ENSSORP00005015393
annotation not available
     
 0.757
ENSSORP00005015394
annotation not available
     
 0.757
VAMP3
Vesicle-associated membrane protein 3-like.
    
 0.757
snap29
Synaptosome associated protein 29.
   
 0.751
ENSSORP00005054626
Synaptosome associated protein 23.1.
   
 0.751
LOC115425943
Vesicle-associated membrane protein 8-like.
    
 0.738
LOC115430583
Peripheral plasma membrane protein CASK-like.
   
 0.728
cask
Calcium/calmodulin dependent serine protein kinase.
   
 0.728
vamp4
Vesicle associated membrane protein 4.
    
 0.712
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.