STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005038458annotation not available (89 aa)    
Predicted Functional Partners:
LOC115438904
Histone H2A.Z.
   
 
 0.818
ruvbl1
RuvB like AAA ATPase 1.
    
 0.784
LOC115425259
Histone H2A.V.
   
 
 0.768
ino80
INO80 complex ATPase subunit.
    
  0.759
dmap1
DNA methyltransferase 1 associated protein 1.
    
 0.752
actl6a
Actin like 6A.
   
  0.738
ing3
Inhibitor of growth family member 3.
   
  0.738
ENSSORP00005036572
RuvB-like AAA ATPase 2.
    
  0.736
LOC115416740
Protein SET.
   
 0.729
ENSSORP00005013567
annotation not available
   
 0.729
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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