STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005038550ATPase cation transporting 13A2. (1082 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 
 0.666
ENSSORP00005053644
annotation not available
   
 0.636
psmb3
Proteasome 20S subunit beta 3.
   
 
  0.620
psma1
Proteasome 20S subunit alpha 1.
   
 
  0.620
psma3
Proteasome 20S subunit alpha 3.
   
 
  0.620
psma5
Proteasome 20S subunit alpha 5.
   
 
  0.620
psmb1
Proteasome 20S subunit beta 1.
   
 
  0.620
psma8
Proteasome 20S subunit alpha 8.
   
 
  0.620
ENSSORP00005049871
annotation not available
    
 0.592
ENSSORP00005049872
Si:ch211-270g19.5.
    
 0.592
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.