STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
foxh1Forkhead box H1. (511 aa)    
Predicted Functional Partners:
LOC115420826
Mothers against decapentaplegic homolog 3-like.
    
 0.933
ENSSORP00005026100
annotation not available
    
 0.933
LOC115425515
Mothers against decapentaplegic homolog 2.
    
 0.933
LOC115439500
Mothers against decapentaplegic homolog 3.
    
 0.933
drap1
DR1 associated protein 1.
    
 0.870
LOC115427970
Mothers against decapentaplegic homolog 4-like.
    
 0.866
SMAD4
SMAD family member 4.
    
 0.866
ENSSORP00005048274
annotation not available
    
 0.866
smad9
SMAD family member 9.
    
 0.813
smad1
SMAD family member 1.
    
 0.813
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.