STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005039258Glutamate receptor, metabotropic 3. (888 aa)    
Predicted Functional Partners:
ENSSORP00005021452
annotation not available
    
  0.858
agt
Angiotensinogen.
   
 
  0.808
ENSSORP00005046001
WD repeat domain 90.
    
   0.706
LOC115425497
Isotocin-neurophysin IT 1-like.
   
 
  0.689
LOC115425498
Vasotocin-neurophysin VT 1-like.
   
 
  0.689
LOC115410673
Guanine nucleotide-binding protein subunit alpha-13-like.
    
  0.683
gna12
G protein subunit alpha 12.
    
  0.683
LOC115424334
Guanine nucleotide-binding protein subunit alpha-13.
    
  0.683
GNG4
G protein subunit gamma 4.
   
  0.662
gng2
G protein subunit gamma 2.
   
  0.662
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.