STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115424846Neoverrucotoxin subunit alpha-like. (699 aa)    
Predicted Functional Partners:
supt16h
SPT16 homolog, facilitates chromatin remodeling subunit.
    
  0.791
cdc73
Cell division cycle 73.
    
  0.709
nelfe
Negative elongation factor complex member E.
    
  0.696
MLKL
Mixed lineage kinase domain like pseudokinase.
    
  0.511
rps27a
Ribosomal protein S27a.
    
  0.488
LOC115438809
Ubiquilin-4-like.
    
  0.488
zfand4
Zinc finger AN1-type containing 4.
    
  0.475
nek7
NIMA related kinase 7.
    
  0.474
LOC115429811
Serine/threonine-protein kinase Nek6-like.
    
  0.474
LOC115416706
Lys-63-specific deubiquitinase BRCC36.
    
  0.471
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.