STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005039878Calpain 1, (mu/I) large subunit a. (730 aa)    
Predicted Functional Partners:
LOC115437149
Apoptosis regulator BAX-like.
   
 
  0.831
LOC115431276
Calpain small subunit 1-like.
   
0.725
LOC115432805
Calpain small subunit 1-like.
   
0.725
LOC115438433
Calpain-1 catalytic subunit-like.
  
 
 
0.702
ENSSORP00005001617
annotation not available
   
 0.692
ENSSORP00005001626
annotation not available
   
 0.692
ENSSORP00005001647
annotation not available
   
 0.692
ENSSORP00005025201
Calpain 8.
  
  
 
0.683
ENSSORP00005040155
annotation not available
  
  
 
0.682
ENSSORP00005048505
Intersectin 2b.
   
 
  0.633
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.