STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpcpd1Glycerophosphocholine phosphodiesterase 1. (673 aa)    
Predicted Functional Partners:
ENSSORP00005014334
annotation not available
    
 0.866
chkb
Choline kinase beta.
    
 0.866
ENSSORP00005028187
Patatin-like phospholipase domain containing 6.
  
 
 0.866
ENSSORP00005035292
Lysophospholipase 2.
    
 0.859
lypla1
Lysophospholipase 1.
    
 0.859
ENSSORP00005038023
Xenotropic and polytropic retrovirus receptor 1a.
     
 0.858
ENSSORP00005038566
Xenotropic and polytropic retrovirus receptor 1b.
     
 0.858
pla2g4a
Phospholipase A2 group IVA.
   
 
 0.844
ache
Acetylcholinesterase (Cartwright blood group).
    
 0.843
ENSSORP00005027642
annotation not available
    
 0.840
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.