STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smim7Small integral membrane protein 7. (75 aa)    
Predicted Functional Partners:
ENSSORP00005049086
Component of oligomeric golgi complex 3.
    
 0.990
ENSSORP00005018214
Component of oligomeric golgi complex 6.
   
 0.989
ENSSORP00005057457
Component of oligomeric golgi complex 2.
   
 0.988
COG5
Component of oligomeric golgi complex 5.
    
 0.986
cog1
Component of oligomeric golgi complex 1.
    
 0.986
cog7
Component of oligomeric golgi complex 7.
    
 0.986
LOC115436933
Conserved oligomeric Golgi complex subunit 8-like.
   
 0.974
ENSSORP00005018521
Component of oligomeric golgi complex 8.
   
 0.974
rint1
RAD50 interactor 1.
    
 0.899
stx5
Syntaxin 5.
    
 0.883
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.