STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005040296annotation not available (1039 aa)    
Predicted Functional Partners:
ENSSORP00005020925
annotation not available
    
 0.917
ENSSORP00005029523
Rap guanine nucleotide exchange factor (GEF) 4.
    
 0.917
ENSSORP00005020924
annotation not available
    
 0.896
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.875
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.793
ENSSORP00005015393
annotation not available
    
  0.790
ENSSORP00005001049
Bassoon (presynaptic cytomatrix protein) b.
   
0.765
ENSSORP00005015394
annotation not available
   
 0.729
ENSSORP00005028093
annotation not available
   
 0.729
ENSSORP00005028172
annotation not available
   
 0.729
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.