STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005041563annotation not available (831 aa)    
Predicted Functional Partners:
suv39h1
Suppressor of variegation 3-9 homolog 1.
    
 0.940
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
     
 0.932
sirt1
Sirtuin 1.
     
 0.926
rpp30
Ribonuclease P/MRP subunit p30.
     
 0.870
ezh2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
    
  0.828
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
    
  0.828
ENSSORP00005003021
SUZ12 polycomb repressive complex 2 subunit a.
     
 0.815
suz12
SUZ12 polycomb repressive complex 2 subunit.
     
 0.815
ENSSORP00005045681
Chromodomain helicase DNA binding protein 1-like.
     
 0.796
CBX1
Chromobox 1.
    
 0.788
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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