STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005041646annotation not available (240 aa)    
Predicted Functional Partners:
ENSSORP00005019876
annotation not available
    
  0.872
apaf1
Apoptotic peptidase activating factor 1.
   
 0.787
pold2
DNA polymerase delta 2, accessory subunit.
    
 0.781
ENSSORP00005021029
annotation not available
    
 0.769
ENSSORP00005021034
annotation not available
    
 0.769
pold1
DNA polymerase delta 1, catalytic subunit.
   
 0.747
ENSSORP00005001606
Translocase of outer mitochondrial membrane 20.
    
  0.729
ENSSORP00005032619
AT rich interactive domain 4A (RBP1-like).
    
  0.729
ENSSORP00005035149
annotation not available
    
  0.729
snrpe
Small nuclear ribonucleoprotein polypeptide E.
   
 0.702
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.