STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115419499Retinol dehydrogenase 10-B-like. (315 aa)    
Predicted Functional Partners:
LOC115439264
Cytochrome P450 26A1.
  
 
 0.894
LOC115438511
Cytochrome P450 26B1.
  
 
 0.865
dhrs3
Dehydrogenase/reductase 3.
  
  
0.859
LOC115417182
Lecithin retinol acyltransferase-like.
   
 0.854
cd3e
CD3e molecule.
   
 0.850
ENSSORP00005042874
Retinol dehydrogenase 5 (11-cis/9-cis).
  
 
0.849
ENSSORP00005005339
Lecithin retinol acyltransferase b, tandem duplicate 2.
   
 0.847
LOC115423909
All-trans-retinol 13,14-reductase-like.
    
 0.843
LOC115417767
Retinal Mueller cells isomerohydrolase-like.
   
 
 0.842
rpe65
Retinoid isomerohydrolase RPE65.
   
 
 0.842
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.