STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trappc3Trafficking protein particle complex 3. (182 aa)    
Predicted Functional Partners:
trappc10
Trafficking protein particle complex 10.
    
 0.999
LOC115416400
Trafficking protein particle complex subunit 1-like.
   
 0.999
trappc8
Trafficking protein particle complex 8.
    
 0.999
trappc2l
Trafficking protein particle complex 2 like.
    
 0.999
trappc2
Trafficking protein particle complex 2.
    
 0.999
trappc4
Trafficking protein particle complex 4.
   
 0.999
trappc11
Trafficking protein particle complex 11.
    
 0.998
ENSSORP00005029482
Trafficking protein particle complex 9.
    
 0.996
trappc12
Trafficking protein particle complex 12.
    
 0.996
LOC115423459
Trafficking protein particle complex subunit 5-like.
   
 0.992
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.