STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005042401SEC11 homolog A, signal peptidase complex subunit. (167 aa)    
Predicted Functional Partners:
ENSSORP00005016630
Signal peptidase complex subunit 2.
   
 0.998
spcs3
Signal peptidase complex subunit 3.
   
 0.998
spcs1
Signal peptidase complex subunit 1.
   
 0.998
nmbr
Neuromedin B receptor.
     
 0.919
kptn
Kaptin, actin binding protein.
    
 0.908
kti12
KTI12 chromatin associated homolog.
     
 0.903
ENSSORP00005020879
Gastrin-releasing peptide receptor.
     
 0.898
ENSSORP00005031431
Gastrin-releasing peptide receptor.
     
 0.898
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.885
ENSSORP00005054417
annotation not available
     
 0.884
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.