STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115430707Nuclear receptor subfamily 0 group B member 1-like. (246 aa)    
Predicted Functional Partners:
nr5a1
Nuclear receptor subfamily 5 group A member 1.
    
 0.956
ENSSORP00005054552
Nuclear receptor subfamily 5, group A, member 2.
    
0.956
rps28
Ribosomal protein S28.
    
  0.801
ENSSORP00005039276
DEAH (Asp-Glu-Ala-His) box helicase 9.
    
  0.800
rpl8
Ribosomal protein L8.
    
 0.797
rps21
Ribosomal protein S21.
    
  0.788
ENSSORP00005027411
Ribosomal protein S23.
    
 0.784
rpl36
Ribosomal protein L36.
     
 0.764
rpl24
Ribosomal protein L24.
    
  0.757
rpl6
Ribosomal protein L6.
    
  0.756
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.