STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005043268annotation not available (264 aa)    
Predicted Functional Partners:
ENSSORP00005037381
Protection of telomeres 1 homolog.
    
 0.883
cdc73
Cell division cycle 73.
   
 0.866
rtf1
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.864
paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.846
LOC115426564
Aurora kinase B-like.
    
 0.820
aurka
Aurora kinase A.
    
 0.820
supt16h
SPT16 homolog, facilitates chromatin remodeling subunit.
    
 0.780
ENSSORP00005044309
SPT6 homolog, histone chaperone and transcription elongation factor.
    
 0.776
ssrp1
Structure specific recognition protein 1.
    
 0.775
cinp
Cyclin dependent kinase 2 interacting protein.
    
 0.773
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.