STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115415191Bcl-2-modifying factor-like. (186 aa)    
Predicted Functional Partners:
dnal4
Dynein axonemal light chain 4.
    
 0.844
LOC115411472
Apoptosis regulator Bcl-2-like.
    
 0.794
LOC115411472-2
Apoptosis regulator Bcl-2-like.
    
 0.794
DYNLL2
Dynein light chain 2, cytoplasmic.
    
 0.772
LOC115432974
Dynein light chain 1, cytoplasmic-like.
    
 0.772
ENSSORP00005037314
annotation not available
    
 0.772
LOC115425668
Dynein light chain 2, cytoplasmic-like.
    
 0.772
LOC115434889
Induced myeloid leukemia cell differentiation protein Mcl-1-like.
    
 0.744
ENSSORP00005009242
Mitogen-activated protein kinase 8b.
    
  0.687
ENSSORP00005018497
Mitogen-activated protein kinase 10.
    
  0.687
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.