STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spryd4SPRY domain containing 4. (224 aa)    
Predicted Functional Partners:
tmem192
Transmembrane protein 192.
   
  0.823
gtpbp8
GTP binding protein 8 (putative).
   
  
 0.554
LOC115412584
Golgi pH regulator.
      
 0.533
yeats4
YEATS domain containing 4.
      
 0.524
ankrd46
Ankyrin repeat domain 46.
    
 0.509
dhodh
Dihydroorotate dehydrogenase (quinone).
   
    0.465
zfand4
Zinc finger AN1-type containing 4.
    
  0.437
gas7
Growth arrest specific 7.
    
  0.430
LOC115410819
Growth arrest-specific protein 7-like.
    
  0.430
ENSSORP00005031430
annotation not available
    
 
 0.413
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.