STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115413755protein-L-isoaspartate(D-aspartate) O-methyltransferase-like. (249 aa)    
Predicted Functional Partners:
ENSSORP00005046228
tRNA-yW synthesizing protein 1 homolog (S. cerevisiae).
  
  
 0.533
sod2
Superoxide dismutase 2.
  
  
 0.520
ENSSORP00005042518
glutamyl-prolyl-tRNA synthetase 1.
     
 0.496
gart
annotation not available
     
 0.494
borcs5
BLOC-1 related complex subunit 5.
   
  
 0.480
tmbim6
Transmembrane BAX inhibitor motif containing 6.
      
 0.475
ndufs3
NADH:ubiquinone oxidoreductase core subunit S3.
  
   0.456
mettl6
Methyltransferase like 6.
      
 0.437
adsl
Adenylosuccinate lyase.
  
  
 0.426
LOC115414914
Dehydrodolichyl diphosphate synthase complex subunit nus1-like.
     
 0.413
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.