STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005047200Sorting nexin 19b. (965 aa)    
Predicted Functional Partners:
ENSSORP00005026275
Sorting nexin 29.
   
 0.552
ENSSORP00005026283
Sorting nexin 29.
   
 0.552
snx15
Sorting nexin 15.
     
 0.547
ykt6
YKT6 v-SNARE homolog.
     
 0.535
ENSSORP00005044235
annotation not available
     
 0.522
snx10
Sorting nexin 10.
     
 0.512
ENSSORP00005039139
Sorting nexin 10a.
     
 0.512
stx16
Syntaxin 16.
     
 0.489
stx5
Syntaxin 5.
     
 0.487
stx10
Syntaxin 10.
    
 0.469
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.