STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005047718Retinol binding protein 1, cellular, tandem duplicate 1. (136 aa)    
Predicted Functional Partners:
sirt1
Sirtuin 1.
    
  0.847
sirt2
Sirtuin 2.
    
  0.847
QPRT
Quinolinate phosphoribosyltransferase.
     
 0.812
ENSSORP00005000179
annotation not available
     
 0.806
ENSSORP00005056758
Stimulated by retinoic acid 6.
     
 0.806
LOC115438458
Lecithin retinol acyltransferase-like.
     
 0.767
lrat
Lecithin retinol acyltransferase.
     
 0.767
LOC115418418
Transthyretin-like.
   
 
 0.737
LOC115417182
Lecithin retinol acyltransferase-like.
     
 0.733
LOC115437957
NAD-dependent protein deacylase sirtuin-5, mitochondrial-like.
    
  0.711
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.