STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115433990Peptidyl-prolyl cis-trans isomerase A-like. (190 aa)    
Predicted Functional Partners:
slc25a4
Solute carrier family 25 member 4.
   
 0.936
LOC115432854
ADP/ATP translocase 3-like.
   
 0.932
LOC115426999
ADP/ATP translocase 3.
   
 0.932
VDAC2
Voltage-dependent anion-selective channel protein 2-like.
   
 0.869
ENSSORP00005023255
Voltage-dependent anion channel 1.
   
 0.869
LOC115425846
Voltage-dependent anion-selective channel protein 2-like.
   
 0.869
LOC115434192
Voltage-dependent anion-selective channel protein 2.
   
 0.869
ENSSORP00005055385
Zgc:56235.
   
 0.869
nup107
Nucleoporin 107.
   
 0.851
ENSSORP00005024225
annotation not available
    
 0.842
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.