STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115427669SLAIN motif-containing protein-like. (633 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.961
fras1
Fraser extracellular matrix complex subunit 1.
    
 0.727
ENSSORP00005033120
Fras1 related extracellular matrix 1a.
    
 0.709
ENSSORP00005046742
annotation not available
    
 0.709
ENSSORP00005046749
Fras1 related extracellular matrix 1b.
    
 0.709
rps28
Ribosomal protein S28.
   
  0.673
gle1
GLE1 RNA export mediator.
    
 0.669
rps15
Ribosomal protein S15.
   
  0.665
ENSSORP00005049858
Myb-like, SWIRM and MPN domains 1.
    
 0.663
rps11
Ribosomal protein S11.
   
 0.654
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.