STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005047899annotation not available (1143 aa)    
Predicted Functional Partners:
LOC115436394
Apoptosis-associated speck-like protein containing a CARD.
   
 0.583
LOC115436393
Apoptosis-associated speck-like protein containing a CARD.
   
 0.583
ripk2
Receptor interacting serine/threonine kinase 2.
   
 0.568
nek7
NIMA related kinase 7.
    
  0.535
rel
REL proto-oncogene, NF-kB subunit.
   
  0.528
rela
RELA proto-oncogene, NF-kB subunit.
   
  0.528
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
  0.521
LOC115414948
Heat shock protein HSP 90-alpha.
    
  0.520
ENSSORP00005038201
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
    
  0.520
rps27a
Ribosomal protein S27a.
    
  0.496
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.