STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005048107Transferrin-a. (699 aa)    
Predicted Functional Partners:
LOC115436977
Transferrin receptor protein 1-like.
  
 0.897
LOC115410975
Transferrin receptor protein 1-like.
  
 0.897
ENSSORP00005029244
annotation not available
    
 0.807
ENSSORP00005052635
Erythropoietin a.
  
 0.754
LOC115430583
Peripheral plasma membrane protein CASK-like.
   
 0.698
cask
Calcium/calmodulin dependent serine protein kinase.
   
 0.698
rps6
Ribosomal protein S6.
   
  0.646
ENSSORP00005040400
Ribosomal protein S7.
    
 0.644
emg1
EMG1 N1-specific pseudouridine methyltransferase.
   
  0.643
dcaf13
DDB1 and CUL4 associated factor 13.
    
  0.642
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.