STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005048133PARK2 co-regulated. (218 aa)    
Predicted Functional Partners:
ENSSORP00005046001
WD repeat domain 90.
    
 
 0.997
ENSSORP00005055663
EF-hand domain (C-terminal) containing 1.
  
 
 0.962
ENSSORP00005015697
Enkurin, TRPC channel interacting protein.
   
 
 0.961
ENSSORP00005051406
EF-hand domain (C-terminal) containing 2.
  
 
 0.961
ENSSORP00005037515
annotation not available
   
   0.939
ENSSORP00005014156
Cilia and flagella associated protein 20.
    
 
 0.914
ENSSORP00005027699
annotation not available
    
 
 0.911
ENSSORP00005058407
Cilia and flagella associated protein 52.
   
 
 0.903
tekt2
Tektin 2.
   
 
 0.888
ENSSORP00005040789
Cilia and flagella associated protein 126.
   
 
 0.888
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.