STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005048159annotation not available (91 aa)    
Predicted Functional Partners:
LOC115427286
Protein phosphatase 1 regulatory subunit 12C-like.
     
 0.851
LOC115422544
Protein phosphatase 1 regulatory subunit 12B-like.
     
 0.808
LOC115419749
Protein phosphatase 1 regulatory subunit 12B-like.
     
 0.808
ENSSORP00005025227
annotation not available
     
 0.808
ppp1r12a
Protein phosphatase 1 regulatory subunit 12A.
     
 0.808
LOC115438741
Serine/threonine-protein phosphatase PP1-beta catalytic subunit.
     
 0.742
LOC115413675
Serine/threonine-protein phosphatase PP1-beta catalytic subunit-like.
     
 0.742
LOC115414716
Serine/threonine-protein phosphatase PP1-beta catalytic subunit-like.
     
 0.742
LOC115423629
Serine/threonine-protein phosphatase alpha-2 isoform-like.
     
 0.705
ppp1cc
Protein phosphatase 1 catalytic subunit gamma.
     
 0.705
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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