STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc19a1Solute carrier family 19 member 1. (535 aa)    
Predicted Functional Partners:
tpmt
Thiopurine S-methyltransferase.
      
 0.536
hmgcl
3-hydroxy-3-methylglutaryl-CoA lyase.
      
 0.535
LOC115431078
Folate receptor alpha-like.
      
 0.533
slc25a26
Solute carrier family 25 member 26.
      
 0.523
ENSSORP00005051959
mutS homolog 4.
      
 0.515
mtrr
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
      
 0.503
as3mt
Arsenite methyltransferase.
   
  
 0.496
ENSSORP00005053065
annotation not available
    
   0.485
mthfr
Methylenetetrahydrofolate reductase.
      
 0.482
slc25a19
Solute carrier family 25 member 19.
      
 0.456
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.