STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005049545Si:ch73-206d17.1. (269 aa)    
Predicted Functional Partners:
kitlg
KIT ligand.
    
 0.641
pgf
Placental growth factor.
    
 0.639
ENSSORP00005004753
annotation not available
    
 0.614
ENSSORP00005004757
Interleukin 34.
    
 0.614
LOC115424659
Trichohyalin-like.
    
 0.609
LOC115438591
Espin-like.
    
 0.609
ENSSORP00005016535
annotation not available
    
 0.587
plcg1
Phospholipase C gamma 1.
    
 0.587
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
   
 0.587
plcg2
Phospholipase C gamma 2.
    
 0.587
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.