STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115432234Short transient receptor potential channel 4-like. (918 aa)    
Predicted Functional Partners:
ENSSORP00005057357
Transient receptor potential cation channel, subfamily C, member 1.
  
 
0.789
ENSSORP00005057362
Transient receptor potential cation channel, subfamily C, member 1.
  
 
0.788
ENSSORP00005057356
annotation not available
    
 0.783
LOC115411949
Bone morphogenetic protein receptor type-2-like.
    
 0.719
bmpr2
Bone morphogenetic protein receptor type 2.
    
 0.719
PRKCB
Protein kinase C beta.
   
 0.665
LOC115416970
Protein kinase C beta type-like.
   
 0.665
ENSSORP00005032188
Protein kinase C, gamma.
   
 0.665
LOC115423991
Protein kinase C alpha type-like.
   
 0.665
PRKCA
Protein kinase C alpha type-like.
   
 0.665
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.