STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005049871annotation not available (51 aa)    
Predicted Functional Partners:
ENSSORP00005020907
Si:dkey-28b4.8.
    
 0.943
atp2a1
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1.
   
 0.940
LOC115429526
Sarcoplasmic/endoplasmic reticulum calcium ATPase 2.
   
 0.940
LOC115425842
Sarcoplasmic/endoplasmic reticulum calcium ATPase 2-like.
   
 0.940
ENSSORP00005043134
annotation not available
   
 0.940
ENSSORP00005043135
annotation not available
   
 0.940
LOC115439548
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1.
   
 0.940
LOC115437038
cAMP-dependent protein kinase catalytic subunit beta.
    
  0.935
LOC115424263
cAMP-dependent protein kinase catalytic subunit alpha.
    
  0.876
LOC115420176
cAMP-dependent protein kinase catalytic subunit alpha-like.
    
  0.876
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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