STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005049904Contactin 3b. (1023 aa)    
Predicted Functional Partners:
ENSSORP00005002110
annotation not available
    
0.815
ENSSORP00005025846
annotation not available
    
 0.774
LOC115419542
Receptor-type tyrosine-protein phosphatase gamma-like.
    
 0.774
ENSSORP00005025947
annotation not available
    
 0.768
LOC115411954
Amyloid-beta A4 protein-like.
   
 
 0.724
APP
Amyloid beta precursor protein.
   
 
 0.724
ENSSORP00005002812
Neurofascin homolog (chicken) a.
    
0.716
ENSSORP00005010003
L1 cell adhesion molecule, paralog a.
    
0.716
ENSSORP00005011780
annotation not available
    
0.716
ENSSORP00005023748
annotation not available
    
0.716
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.