STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005050259Dachsous cadherin-related 1a. (3275 aa)    
Predicted Functional Partners:
ctnnb1
Catenin beta 1.
    
 0.869
ENSSORP00005021929
annotation not available
    
 0.838
LOC115419697
Junction plakoglobin-like.
    
 0.838
cdh17
Cadherin 17.
   
0.748
CDH12
Cadherin 12.
    
 
0.724
ENSSORP00005058299
annotation not available
    
 
0.724
LOC115434373
Cadherin-5-like.
     
0.721
FJX1
Four-jointed box protein 1-like.
   
 0.719
ENSSORP00005043567
Four-jointed box kinase 1.
   
 0.719
CDH20
Cadherin 20.
   
 
0.718
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.