STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115436872Period circadian protein homolog 2-like. (1456 aa)    
Predicted Functional Partners:
ENSSORP00005040335
Timeless circadian clock.
   
 0.970
LOC115426950
F-box/WD repeat-containing protein 11.
    
 0.928
csnk1d
Casein kinase 1 delta.
    
 0.897
csnk1e
Casein kinase 1 epsilon.
    
 0.897
ENSSORP00005026463
Casein kinase 1, epsilon.
    
 0.897
LOC115428526
Circadian locomoter output cycles protein kaput-like.
    
0.879
LOC115432699
Neuronal PAS domain-containing protein 2-like.
    
0.879
CLOCK
Clock circadian regulator.
    
0.879
bhlhe41
Basic helix-loop-helix family member e41.
    
 0.856
LOC115422244
Cryptochrome-1-like.
   
 0.843
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.