STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005050636Zgc:152968. (878 aa)    
Predicted Functional Partners:
rexo2
RNA exonuclease 2.
  
 0.929
ENSSORP00005018494
poly(A) specific ribonuclease subunit PAN3.
    
 0.920
pcna
Proliferating cell nuclear antigen.
  
 0.910
rexo1
RNA exonuclease 1 homolog.
  
  
 
0.855
ENSSORP00005004439
annotation not available
     
0.846
ENSSORP00005034650
F-box DNA helicase 1.
  
 
 0.771
exosc10
Exosome component 10.
  
 0.726
med6
Mediator complex subunit 6.
   
  0.725
ENSSORP00005006312
Guanine monophosphate synthase.
  
 
 0.718
ENSSORP00005000101
annotation not available
  
 0.673
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.