STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gemin8Gem nuclear organelle associated protein 8. (201 aa)    
Predicted Functional Partners:
gemin7
Gem nuclear organelle associated protein 7.
    
 0.998
gemin6
Gem nuclear organelle associated protein 6.
    
 0.997
ddx20
DEAD-box helicase 20.
    
 0.992
LOC115426446
Survival motor neuron protein 1-like.
    
 0.989
strap
Serine/threonine kinase receptor associated protein.
    
 0.989
ENSSORP00005049947
Gem (nuclear organelle) associated protein 5.
    
 0.986
ENSSORP00005010558
annotation not available
    
 0.978
gemin2
Gem nuclear organelle associated protein 2.
    
 0.973
ENSSORP00005038709
Small nuclear ribonucleoprotein polypeptide F.
    
 0.968
snrpe
Small nuclear ribonucleoprotein polypeptide E.
    
 0.953
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.