STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eef1aknmteEF1A lysine and N-terminal methyltransferase. (692 aa)    
Predicted Functional Partners:
vamp4
Vesicle associated membrane protein 4.
     
 0.877
LOC115429187
Vesicle-associated membrane protein 8-like.
     
 0.762
smarcc1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1.
    
 0.708
ENSSORP00005057693
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.
    
 0.708
ENSSORP00005049858
Myb-like, SWIRM and MPN domains 1.
    
 0.681
ENSSORP00005006072
annotation not available
     
 0.566
dnm3
Dynamin 3.
     
 0.566
trmt44
tRNA methyltransferase 44 homolog.
   
  
 0.545
dnm2
Dynamin 2.
     
 0.540
ENSSORP00005018328
annotation not available
     
 0.540
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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