STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ewsr1EWS RNA binding protein 1. (603 aa)    
Predicted Functional Partners:
ENSSORP00005009340
Heterogeneous nuclear ribonucleoprotein M.
   
0.945
tardbp
TAR DNA binding protein.
   
 0.847
LOC115420032
TAR DNA-binding protein 43-like.
   
 0.847
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.825
LOC115430378
Heterogeneous nuclear ribonucleoprotein K-like.
   
 0.825
ENSSORP00005039276
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 
 0.814
ybx1
Y-box binding protein 1.
   
 0.775
ENSSORP00005016300
Polymerase (RNA) II (DNA directed) polypeptide G-like.
   
 0.760
ENSSORP00005001970
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
  0.756
taf5l
TATA-box binding protein associated factor 5 like.
    
 0.750
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.