STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005051723Chromosome 5 open reading frame 22. (429 aa)    
Predicted Functional Partners:
LIX1L
Limb and CNS expressed 1 like.
   
 0.784
ENSSORP00005007536
Limb and CNS expressed 1.
   
 0.784
FJX1
Four-jointed box protein 1-like.
   
 0.763
ENSSORP00005043567
Four-jointed box kinase 1.
   
 0.763
c11h1orf109
Chromosome 11 C1orf109 homolog.
   
    0.739
calhm2
Calcium homeostasis modulator family member 2.
   
    0.706
cwc25
CWC25 spliceosome associated protein homolog.
   
    0.701
ENSSORP00005033493
annotation not available
   
    0.696
ENSSORP00005055210
Rubicon like autophagy enhancer.
   
   0.677
frmd6
FERM domain containing 6.
    
 0.667
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.