STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115421051Uncharacterized LOC115421051. (656 aa)    
Predicted Functional Partners:
tp73
Tumor protein p73.
    
 0.872
ENSSORP00005056399
Tumor protein p63.
    
 0.872
tp53
Tumor protein p53.
    
 0.872
poli
DNA polymerase iota.
    
 0.803
polh
DNA polymerase eta.
    
 0.803
rps27a
Ribosomal protein S27a.
    
 0.755
LOC115438809
Ubiquilin-4-like.
    
 0.755
rev1
REV1 DNA directed polymerase.
    
 0.737
ENSSORP00005046943
Polymerase (DNA directed) kappa.
    
 0.737
rfc3
Replication factor C subunit 3.
   
 
  0.658
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.