STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115425712Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform-like. (509 aa)    
Predicted Functional Partners:
LOC115410781
Calcineurin subunit B type 1-like.
   
 0.980
ppp3r1
Protein phosphatase 3 regulatory subunit B, alpha.
   
 0.953
ENSSORP00005052509
Anaphase promoting complex subunit 1.
    
 0.929
NFATC1
Nuclear factor of activated T-cells, cytoplasmic 1-like.
    
 0.928
ENSSORP00005014612
Nuclear factor of activated T cells 1.
    
 0.907
ENSSORP00005014700
Nuclear factor of activated T cells 1.
    
 0.907
ENSSORP00005040855
Protein phosphatase 2 phosphatase activator.
    
 0.907
ENSSORP00005055778
Cell division cycle 16 homolog (S. cerevisiae).
   
  0.906
CALML6
Calmodulin like 6.
    
 0.903
ENSSORP00005020683
Nuclear factor of activated T cells 2a.
    
 0.890
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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