STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115436045Carcinoembryonic antigen-related cell adhesion molecule 5-like. (1026 aa)    
Predicted Functional Partners:
LOC115429610
Butyrophilin subfamily 1 member A1-like.
   
 0.573
lgr4
Leucine rich repeat containing G protein-coupled receptor 4.
    
 0.541
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 0.541
ENSSORP00005017029
Relaxin family peptide receptor 1.
    
  0.529
ENSSORP00005038431
Relaxin family peptide receptor 2a.
    
  0.529
LOC115412629
Cytotoxic T-lymphocyte protein 4-like.
    
 0.508
LOC115435263
B-cell lymphoma 3 protein homolog.
   
 0.502
ENSSORP00005007323
annotation not available
   
0.502
ENSSORP00005054871
annotation not available
   
0.502
LOC115435805
Carcinoembryonic antigen-related cell adhesion molecule 5-like.
   
0.502
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.