STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nr2f1Nuclear receptor subfamily 2 group F member 1. (411 aa)    
Predicted Functional Partners:
med1
Mediator complex subunit 1.
    
  0.739
ENSSORP00005038694
Nuclear receptor corepressor 1.
    
 0.722
ENSSORP00005022636
Nuclear receptor corepressor 2.
    
 0.696
ENSSORP00005038768
annotation not available
    
 0.696
hsp90b1
Heat shock protein 90 beta family member 1.
   
 0.619
med14
Mediator complex subunit 14.
    
  0.571
rpl9
Ribosomal protein L9.
    
  0.558
LOC115413669
Fatty acid-binding protein, brain-like.
    
 0.555
FABP7
Fatty acid binding protein 7.
    
 0.555
med17
Mediator complex subunit 17.
    
  0.551
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.