STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115430076ATP synthase subunit alpha, mitochondrial-like. (556 aa)    
Predicted Functional Partners:
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
   
 0.999
atp5f1d
ATP synthase F1 subunit delta.
  
 0.999
atp5f1c
ATP synthase F1 subunit gamma.
 
 0.999
atp5po
ATP synthase peripheral stalk subunit OSCP.
  
 0.999
ENSSORP00005029116
ATP synthase peripheral stalk subunit d.
   
 0.998
LOC115412573
ATP synthase subunit beta, mitochondrial-like.
 
0.996
LOC115433054
ATP synthase subunit beta, mitochondrial.
 
0.996
LOC115424258
V-type proton ATPase 16 kDa proteolipid subunit.
  
 0.994
ATP5MC1
ATP synthase F(0) complex subunit C3, mitochondrial-like.
  
 0.994
LOC115417048
ATP synthase F(0) complex subunit C3, mitochondrial-like.
  
 0.994
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
Server load: low (36%) [ZH]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.