STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndufa1NADH:ubiquinone oxidoreductase subunit A1. (70 aa)    
Predicted Functional Partners:
ndufa5
NADH:ubiquinone oxidoreductase subunit A5.
   
 0.999
ndufab1
NADH:ubiquinone oxidoreductase subunit AB1.
   
 0.999
LOC115410084
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like.
   
 0.999
ndufs5
NADH:ubiquinone oxidoreductase subunit S5.
   
 0.999
ndufa6
NADH:ubiquinone oxidoreductase subunit A6.
   
 0.999
ndufs6
NADH:ubiquinone oxidoreductase subunit S6.
   
 0.999
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
   
 0.999
ndufa7
NADH:ubiquinone oxidoreductase subunit A7.
   
 0.999
NDUFB1
NADH:ubiquinone oxidoreductase subunit B1.
   
 0.999
ndufb3
NADH:ubiquinone oxidoreductase subunit B3.
   
 0.999
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.