STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSORP00005055810annotation not available (418 aa)    
Predicted Functional Partners:
ENSSORP00005047893
annotation not available
 
    
 0.733
rab27a
RAB27A, member RAS oncogene family.
    
 
 0.433
LOC115425267
Ras-related protein Rab-27B-like.
    
 
 0.433
ENSSORP00005003796
RAB3D, member RAS oncogene family, b.
   
 
 0.422
LOC115418596
Ras-related protein Rab-3B-like.
   
 
 0.422
ENSSORP00005043499
RAB3C, member RAS oncogene family.
   
 
 0.422
LOC115436833
Ras-related protein Rab-3A-like.
   
 
 0.422
rab3a
RAB3A, member RAS oncogene family.
   
 
 0.422
LOC115425972
Ras-related protein Rab-3D-like.
   
 
 0.422
Your Current Organism:
Sphaeramia orbicularis
NCBI taxonomy Id: 375764
Other names: S. orbicularis, orbiculate cardinalfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.